Showing posts with label Flublogia. Show all posts
Showing posts with label Flublogia. Show all posts

Looking For Zebras

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Google Search Screenshot

 

# 6761

 

 

Every day a small, dedicated group of volunteers around the world begin their day with a pot of coffee, an internet connection, and the goal of finding hints of `a zebra’ – an unusual or exotic disease outbreak – from hundreds of news sources around the globe.

 

You see the results of their work often in this blog, or on Crof's H5N1, and in the daily listings of `flu forums’ like FluTrackers and the Flu Wiki.  

 

Sure, Crof and I hunt for, find, and translate many of our own articles, but its a big internet and and even bigger world. So we often rely on the dozens of newshounds who spend countless hours scouring the internet, looking for tiny morsels of potentially important information. 

 

This is difficult, exacting, sometimes mind-numbing work.  Particularly when dealing with languages like Arabic or Chinese.

  

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As you can see, just finding the articles that need to be translated is a major undertaking.

 

Once a likely article is found, newshounds use a variety of translation methods (including the linguistic prowess of native speakers) to turn Bahasan, or Arabic, Spanish, French, or Chinese into some semblance of English. Often, when we must rely on machine translations, we use more than one translation system, to try to get the most readable result.

 

Even then, it takes experience and knowledge of idioms and local customs to properly interpret these stories - skills that many of these newshounds have developed over these many months (and sometimes years) of volunteer work.

 

All the more remarkable, these newshounds are uncompensated for their time and effort.  They do it because they believe it is important.

 

You’ll see that Crof and I try to credit these volunteer newshounds whenever we use the fruits of their labor because recognition is pretty much the only reward (other than personal satisfaction) they get. 

 

An incomplete list of some of the more prolific newshounds would include:


Gert van der Hoek, Ronan Kelly, Giuseppe Michieli, Tetano, Shiloh, Diane Morin, Pathfinder, Missouri Watcher, Treyfish, Alert, Tonka, Laidback Al, Carol@SC, Sharon Sanders, Alaska Denise, Hawkeye, Arkanoid Legent, Catbird,  Commonground, Shannon, Mingus, mixin & AlohaOR.

 

There are many others, including some that work on other forums than FluTrackers and the Flu Wiki.  So my apologies to those who I failed to mention.

 

Last April, when a mysterious pneumonia swept a hospital in Jordan the newshounds at FluTrackers began a thread on the outbreak, and over the next 7 days made 90 posts, including scores of Arabic news article translations.

 

We now know that this incident was the first known outbreak of the novel coronavirus now garnering considerable attention in the Middle East. 

 

Most of the time, outbreaks like this turn out to be something far less exotic, like seasonal influenza, Dengue or Chikungunya.  But the truth is, most disease outbreaks – regardless of their cause – start out looking pretty much the same; a cluster of flu-like-illnesses or pneumonias.

 

So newshounds take all of these outbreaks seriously, accepting that most will turn out to be something other than zebras, but documenting them anyway.

 

Because, like the cluster of unexplained pneumonias last April, sometimes they make sense only in retrospect. 

 

Today we’ve a good example of an `odd’ news report posted by Gert van der Hoek on FluTrackers that may – or may not – become a bigger story in the days to come.

 

The thread is Brazil: unknown respiratory disease, and it contains a machine translated account of five patients being transferred to a larger hospital due to an unknown pneumonia.  According to the news report, another 14 people have similar symptoms.

 

Here is an excerpt from the news report:

 

02/12/2012
Respiratory syndrome patients are transferred from Bethlehem to Curuçá


From the newsroom  Para News Agency

The State Department of Public Health (Sespa) decided to transfer to Bethlehem five patients with clinical gentler, who were admitted to the Hospital Municipal Curuçá with symptoms of acute respiratory syndrome because as yet undefined.


The aim is to ensure better care of the sick, whose cases are still being investigated by the Epidemiological Monitoring of Sespa in conjunction with the 3rd Regional Center for Health in Castlebay, the Municipal Health Curuçá, Central Laboratory of the State (Lacen), Centre Skill Scientific Renato Chaves (CPC) and Instituto Evandro Chagas.


Patients transferred to the capital will be admitted to the Unit Diagnosis of Meningitis (UDM), the University Hospital João de Barros Barreto, under monitoring of infectious disease. In addition to these five people, 14 more showed symptoms of the disease since the beginning of the outbreak in Curuçá Municipal Hospital, where a 17-year-old died in the ICU of the Holy House, on the evening of Saturday, 01.

(Continue . . . )

 

Armed with this information, I did a quick search myself, and found several other news reports regarding this `outbreak’, which may be viral, bacterial, or possibly even the result of chemical or radioactive exposure.

 

A report, dated yesterday from the Diario do Para, states:

 

Sai result today on infection in hospital

Monday, 03/12/2012, 1:47 a.m.

The State Department of Health (SESPA) has no information about what the real focus of the contamination in Unit Joint Health Dr. Henrique Alves de Christo, located in the municipality of Curuçá, northeastern state. The complaint made by the hospital staff said that about 10 employees were contaminated by alleged leakage of a chemical used to make dental x-ray. Some employees are hospitalized in Curuçá and others were taken to Bethlehem for treatment.

 

Since last week the SESPA became aware of the case and is investigating the complaint on two lines of research. One is that the symptoms reported by employees can be caused by bacteria or a respiratory virus.

 

Laboratory technicians Central State (Lacen) and Epidemiological Surveillance investigating the case. The result of tests performed by teams due out today (Monday).

(Continue . . . )


 

 

Is this a `Zebra’?

 

We won’t know that until more information comes in. Most turn out to be less than earthshaking in their impact.  But every once in awhile . . .

 

The point is, these stories – whether they turn out to be something of global importance or not – are being monitored, organized, and posted every day by the newshounds of Flublogia – making a historical record available for anyone who wants to look.

 

 

I couldn’t do a lot of what I do in this blog without their capable assistance, and for that, they get my profound thanks and admiration.

 

 

_________________________________________________

The term `Zebra’ comes from the famous adage, retold to almost every beginning medical student, is that if you are in Central Park, and you hear hoof beats coming up behind you . . . think horses . . not zebras.

 

Simply put, doctors should always seek to rule out the most likely diagnoses first, not some obscure and exotic disease.

 

The caveat being that every once in awhile you run into a zebra.

»» Read More

The View From Flublogia

 


# 5883

 

Author and filmmaker Peter Christian Hall (see  A Recurrent Fever) - in the wake of the release of the movie `Contagion’ - recently interviewed a number of flu bloggers, and his story is published today on The Huffington Post website.

 

Follow the link below to read it.

 

Contagion Grips 'Flublogia'

Posted: 10/6/11 03:24 PM ET

»» Read More

Thursday Morning Roundup

 

# 4950

 

 

After a rainy drive across the state I arrived at St. Augustine late yesterday afternoon.  T.S. Nicole died over Cuba, and the weather has cleared remarkably.

 

Since this is a bit of a working holiday for me, I’ll keep these entries brief until I return.  This morning, some links to stories and events around Flublogia.

 

Ida at BFIC has 3 reports overnight on the continued spread of H5N1 in poultry in South Sulawesi and new outbreaks in West Sulawesi.

 

West Sulawesi ::: Bird flu uprises in 2010

Posted by Ida on September 30, 2010

Mamuju – Avian influenza or bird flu H5N1 prevalence in West Sulawesi province is uprising in September 2010.

Balikpapan, East Kalimantan ::: Chickens death confirmed bird flu

Posted by Ida on September 30, 2010

Balikpapan – The cause of chickens’ death in Kelurahan Manggar, Balikpapan Timur, East Kalimantan province is identified of bird flu H5N1 virus. Diagnosis was done through rapid test by of Agriculture, Marine and Fishery Service. Samples have been sent to Banjar Baru, South Kalimantan for confirmation.

Polman, West Sulawesi ::: Bird flu has spread to Kabupaten Polman

Posted by Ida on September 30, 2010

Polewali Mandar – After hitting three municipals (kabupaten) in South Sulawesi province – Pinrang, Sidrap and Luwu -  bird flu H5N1 is now attacking thousands of chicken in Kecamatan Limboro and Binuang, Kabupaten Polewali Mandar (Polman), West Sulawesi.

 

 

Arkanoid Legent has the latest Australian & New Zealand influenza surveillance data, along with reports on Dengue in Pakistan and the Philippines.

 

 

Australian Influenza Surveillance 2010 - Latest report

The latest report from the Department of Health and Ageing in Australia, excerpt :
Report No. 37
Reporting period 11 to 17 September 2010

  • Levels of influenza-like illness (ILI) in the community have continued to increase through most surveillance systems this reporting period. Local, regional and widespread activity was reported within jurisdictions. However, the number of laboratory confirmed notifications continued to decline.

New Zealand : Pandemic Influenza H1N1 2009 (swine flu) - Update 210

The latest H1N1 update from New Zealand's MOH :
" Overall influenza H1N1 activity continues to decrease below baseline levels. While some cases and clusters of influenza are likely to continue, this is much less frequent now and at a national level we are nearing the end of the second wave of pandemic influenza H1N1 in New Zealand. The Ministry's weekly updates will end next week.

 

Crof has reports on  Underreported Dengue in Pakistan, the unintended consequences of mosquito control in Sri Lanka: Killing our enemy's enemy, and a somewhat breathless report out of Sydney Australia: A world without antibiotics.

 

The `big story’ this week continues to be the hospitalization and isolation of several residents of Pinrang, Indonesia who are experiencing flu-like symptoms after exposure to dead or dying chickens.

]

Thus far, we have no announced laboratory results, and so it is unknown whether any of these people are infected with the bird flu virus. 

 

The numbers appear to shift a bit depending upon the news source, but it appears that 26+ people are being monitored in their homes, and 4 or 5 are hospitalized.  

 

FluTrackers is maintaining a forum thread with updated reports that you can check here.

 

The most recent report comes from Treyfish, and is a translation of a  Para Pos article called  5 Warga Suspect Flu Burung, excerpts of which appear below.

 

Thursday, September 30, 2010
3 Referred to Makassar, 2 Isolated


5 Residents Suspect Bird Flu
THURSDAY, 30 SEPTEMBER 2010


PINRANG - Five residents in District Lanrisang Pinrang otherwise suspect (suspect) bird flu. Three out of five residents, each Nawir (42), Andrews (5) citizens Suppang Saddang Hamlet, and Novi (18) Same Ulue Village on Tuesday night, was referred to the Provincial General Hospital Dr M Wahidin Sudirohusodo.

 

<SNIP>

 

Not less than 26 residents who currently monitoring the Health Department. "These data may increase, but we hope diminished," she said. Rusman explained, which distinguishes the common cold sick with bird flu is body temperature. However, if positive for bird flu, 80 percent of patients will experience death.

 

Authorities say it will take roughly 10 days before test results will be known due to the repeat testing that they require to confirm or rule out the disease.

 

FluTrackers also has reports on msny of other disease outbreaks around the world, medical studies recently published, and other humanitarian crises.

 

You could spend a year there, and not read it all.

 

I’ll check back later in the day to survey the scene, but as you can see, these newshounds and bloggers have everything in Flublogia well covered.

»» Read More

Referral: Crof On Flublogia’s Future

 


# 4621

 

 

Last night Crof over at Crofsblog posted an essay entitled Flublogia after the Pandemic, where he takes a hard look at the failures of North American media outlets to cover important international stories and our societal ignorance over issues like the spread of Dengue,  Malaria, and the rise of other emerging infectious diseases around the world.

 

He’s right of course.  

 

If it doesn’t happen on our shores, or threatens to affect us directly, it isn’t worthy of the 6 o'clock news.

 

Flublogia, particularly the newshounds on flu forums like Flu Wiki and FluTrackers, have devoted a good deal of time and effort tracking these stories, of course.  But their audience is limited, and their members have a keen interest in emerging infectious diseases.

 

For the most part, North Americans remain oblivious to public health concerns outside of our hemisphere.

 

With flu news (at least temporarily) on the decline, Crof has been working to diversify his site to offer more coverage of other diseases like malaria and dengue.   He’s done a terrific job, particularly on his translations of south and central American news stories.

 

Even as Flublogia contracts – such as with the recent shuttering of Effect Measure  -  Crof envisions a new direction for flu bloggers.  

 

Read:

 

Flublogia after the pandemic
»» Read More

Effect Measure’s Farewell Blog

 

 

# 4572

 

 

 

Earlier today I was alerted that the Revere’s at Effect Measure, after more than five years and more than 3500 blogs, would be `closing up shop’.

 

Nothing lasts forever, of course.  But that doesn’t remove the palpable tinge of sadness that comes with this news.

 

Five plus years is a long run on the Internet, particularly given the number of in-depth blogs that have graced the two incarnations of Effect Measure.   It takes a lot of work – and a lot of your life – to keep a serious blog going day-in and day-out over the years.

 


The Reveres will apparently continue to contribute from time to time to The Pump Handle, and so they really aren’t going away.   

 

But we shall miss them just the same.

 

They’ve been very kind to this blogger over the years, and much of what I’ve learned about the science behind influenza was derived from their writings.  They leave behind a veritable treasure trove of good science information.

 

I’m very grateful to them  on a multitude of levels.

 

There will be more details in the week to come, but here is the farewell message from the Reveres.

 

We bid you farewell

Category: Blog • Personal

It's been a long time coming but the time has come. Effect Measure is closing up shop, after 5 and a half years, 3 million visits and 5.1 million page views of some 3500. You commented on them some 37,000 times. It's been a grand ride but to all things there is a season. It's time to simplify my life and while my family has had me all along, at times science got short shrift. Now my time is getting short and I want to turn my attention to my research, the other polar star of my life. "Revere" will continue to post occasionally on Effect Measure's successor site, The Pump Handle (TPH), which will hold down the public health anchor position after EM is gone. We'll provide more details later this week when we officially hand off this spot to our friends and colleagues at TPH. Our archive will be folded into theirs, with details to follow when they are firmed up.

(Continue . . . )

»» Read More

Roundup Of Flublogia

 

 

# 4391

 

 

It’s been several weeks since my last recap of stories from in and around Flublogia (along with other science blogs), so this quiet Sunday morning seems an ideal time to catch up.

 

As always, this is a subjective list of things that I found of interest, and by no means mentions every worthy blog post out there.

 

With influenza on the decline in North America and around the world, much of the focus of Flublogia has shifted away from `breaking news’ to a review of what we’ve learned, or are learning, from this pandemic.

 

You’ll also find a rise in coverage of other EIDs (Emerging Infectious Diseases).

 

My apologies for the good stories I may miss.  So, with that said, in no particularly order . . .

 

 

CIDRAP has a long history of providing in depth coverage of EIDs and other pathogenic threats.   Their frequently updated Novel H1N1 Influenza (Swine Flu) overview is a resource I use on a regular basis.

 

CIDRAP News coverage is second to none, with terrific reporting by editor Robert Roos, staff writer Lisa Schnirring, and contributing writer Maryn McKenna.  

 

A few recent examples include:

 

Hong Kong reports swine-pandemic flu reassortant 

Emergency departments see rise in flu-like illness

Study yields highly pathogenic avian, human flu virus mix

Updated review questions benefits of flu vaccine in elderly

 

If CIDRAP News isn’t among your daily internet stops (they update weekdays - usually late afternoon/early evening EST), it should be.

 

While H1N1 may be declining, H5N1 bird flu reports have been on the rise, with both human and poultry infections reported in places like Indonesia, Vietnam, and Egypt.  

 

Often, we get our first glimpse of these cases from the flu forum newshounds who work diligently each and every day, combing through foreign language media for these sorts of reports. 

 

This is exacting (and sometimes exhausting) work, and it requires both dedication and skill.   You’ll find a tribute to these volunteers in my essay: Newshounds: They Cover The Pandemic Front.

 

I won’t attempt to name them all, but the four whose names seem to be showing up the most in this blog over the past few weeks are; Ironorehopper, Dutchy, Ida at BFIC, and Commonground of Pandemic Information News.

 

My thanks to them, and to all of the other newshounds.

 

Sharon Sanders, editor of FluTrackers conducted another in her series of high profile radio interviews last week, this time with Gregory Härtl, spokesperson for the World Health Organization.  

 

If you missed the broadcast, the show is archived here.

 

My buddy Scott McPherson doesn’t blog as often as most of us would like, but when he does it is invariably an informative, and always entertaining, read.   You’ll find three new blogs this month on his website.

 

The countdown to the release of Maryn McKenna’s new book  SUPERBUG: The Fatal Menace of MRSA continues, with the big day just over 3 weeks away. 

 

Meanwhile, Maryn continues to update us on emerging antibiotic resistant pathogens via her Superbug blog, with several stories that showcased the reports from CBS Evening News with Katie Couric on the use of antibiotics on the farm.

 

CBS antibiotics and farming package, day one
CBS antibiotics and farming, day 2 - and more on the Danish experience
Antibiotics and farming — CBS follow-up video

 

Revere at Effect Measure is drowning writing a grant proposal, but still manages to come up for air on occasion.  Recently Revere looked at the issue of pre-existing conditions and pandemic influenza in Bad flu and underlying medical conditions.

 

Crof over at Crofsblog, is using his Spanish language skills to track emerging infectious diseases in Central and South America, along with his usual terrific coverage of influenza.  You’ll find some of the best coverage of Dengue, Malaria, and other diseases on his blog.

 

Ian York on his Mystery Rays blog continues to fascinate with his historical look back at disease outbreaks of the past, including his recent look at yellow fever (The deadliest, most awe-inspiring of the Plagues ).

 

Prior to that Ian looked at the complex issues of virulence and transmission in an intriguing look at Rabbits, virulence, history, and connections .

 

On the flu front, York `did the math’ and came up with a reasonable approximation on the level of herd immunity we likely have in the United States to novel H1N1 in How many Americans are immune to H1N1?

 

Paul over at Chen Qi continues to publish – in newspaper format – a terrific daily roundup of disease and disaster news. 

 

Vincent Racaniello at the Virology Blog continues with his series of college virology lectures (#10 is now posted), along with his TWiV and TWiP podcasts.  

 

And of course, the flu forums (I visit Flu Wiki and FluTrackers on a daily basis) continue to provide a font of information.

 

 

A sampling of some of my own offerings would include:

 

Influenza B Rising
Assessing A New Antiviral
PNAS: H3N2 And H5N1 Reassortment
Norovirus: The Gift That Keeps On Giving
An H1N1 Seroprevalence Study
TCAD: A Triple Play Combination
H9N2: The Other Bird Flu Threat

 

 

Hopefully this roundup will point you towards an article, or perhaps a resource, you may have missed in the past.

»» Read More

Weekly Roundup Of Flublogia

 

 

# 4330

 

 

Once again I’m back with a recap of some of the stories from in and around Flublogia (and or science blogs) from the past couple of weeks.

 

This is a subjective list of things that I found of interest, and by no means mentions every worthy blog post out there.  It is more of a sampling, and not always restricted to flu.

 

My apologies for the good stories I may miss.  So, with that said, in no particularly order . . .

 

 

This weekend marks the fourth anniversary of the opening of the FluTrackers forum, and so congratulations are in order to Sharon Sanders, Sally, Jeremy - and to the dozens of moderators and advisors who help keep the wheels on the track - and of course to all of the members.    

 

FluTrackers, despite its name, follows more than just influenza.  It has become an enormous online repository of information on all manner of emerging infectious diseases, and is one I avail myself of often.

 

 

Although Revere at Effect Measure has been occupied with writing a major grant proposal, he has managed to find time to take Wolfgang Wodarg to the woodshed over his allegations against the World Health Organization and has offered up an assessment of the  CDC’s epidemiology efforts over the past year.

 

Fire in the hole: Wolfgang Wodarg and WHO

Random thoughts on CDC's swine flu effort: epidemiology and surveillance

 

Maryn McKenna’s Superbug Blog was named a top 50 Health Blog (and deservedly so) by he website The Science of Health, sharing honors with other deserving recipients including Effect Measure and The Pump Handle.

 

Her latest entry concerns budget cuts that will reduce or eliminate critical MRSA surveillance projects:

Bad news in the President's budget request


Three other entries of note include:

 

Recommending: Consumer Reports on hospital infections

Back again to MRSA in animals, and spreading to humans

Once again, flu and bacterial co-infection

 

 

Vincent Racaniello’s Virology Blog continues to provide us with videos of his Columbia University Virology Lectures (up to #5 now), along with access to TWiV his (This week In Virology) and TWiP (This week in Parasitism) podcasts. 

 

Professor Ian York’s  Mystery Rays from Outer Space blog is an eclectic collection of short science essays, and often takes me in unexpected directions.  Three diverse examples from the past ten days include:

 

Tumors as ecosystems

Virus discovery by jigsaw puzzle

Viral resistance and new functions

 

Crof over at Crofsblog has been doing some housekeeping and rearranging of his site, along with first class news gathering.  He also offered his evaluation of a recent contrarian editorial in Annals of viral paranoia VI: Fumento on WHO's real motives.

 

Newshounds on the flu forums (I frequent the Flu Wiki and FluTrackers) have been dealing with fresh reports of bird flu cropping up in Indonesia, Cambodia, India, Bangladesh, Malaysia and Egypt, along with the latest development with pandemic H1N1, and other emerging infectious diseases.  

 

As I’ve stated many times, this blog is highly dependent upon their hard work, and I try to highlight them whenever possible. 

 

Three that have been kept particularly busy over the past couple of weeks have been Ida at BFIC, Commonground at Pandemic Information News, and Paul at Chen Qi.  My thanks go to them, and the rest of the newshounds that are doing the heavy lifting of finding and translating news stories.

 

 

Some of my efforts over the past couple of weeks include:

 

At The Sound Of The Tone
Neurologic Manifestations of Pandemic (H1N1) 2009 Virus Infection
IgG2 and Flu
Indonesia: Changes In The H5N1 Virus
I Only Have Eyes For Flu
Contrarians At The Gate

 

Hopefully you’ll find something in this roundup you missed the first time round.

»» Read More

Contrarians At The Gate

 

 

# 4309

 

 

Although I am not a scientist, I try to keep this blog centered around what passes for our currently accepted understanding of medicine, scientific research, and emerging infectious diseases.   

 

Not that science is always right.  It isn’t.

 

Our knowledge base – and more importantly, our understanding of how things work - is constantly changing.   I would like to be an optimist, and say `constantly expanding’, but things don’t always progress in a linear fashion.

 

There are many areas, of course, where we have no answers.  Or just partial answers.  And many of the things we believe to be true today will eventually be discarded into the `bad idea’ pile of tomorrow.   

 

That’s how science works.  Absolutes are few and far between.  And the process of getting there is often messy.

 

For some, this lack of definitive answers – or immutable truths – renders science useless . . .  or at least highly suspect.  Since it isn’t always perfect, and our understandings are subject to change, they place science into the realm of guesswork or speculation. 

 

They don’t understand that knowledge isn’t a destination . . . it’s a journey.    

 

Historically science has always labored under the burden of public misconception and distrust.   Advances in science usually mean change.  And while change can be good, it isn’t always so. 

 

And for those who prefer (or depend) on the status quo being maintained . . .  well science can be a threat.

 

The popular public perception of scientific research – at least up until the 1940s – was that of the mad scientist.   The Dr. Frankenstein, who meddles with things not meant for man to know – or of the inventor’s of mustard gas or chlorine used during World War I.

 

Gradually, during the 1950s and 1960s (when I grew up), science took on a new, more positive image.  

 

Space flight, jet planes, even computers  .  .  we were entering a world of science-fiction-turned fact. And I suspect that for a lot of us raised during that period, we view science a bit differently than those that came along later. 

 

My heroes growing up were writers like Isaac Asimov (whose numerous non-fiction books tried to explain science to the layman), the Mercury Astronauts, Don Herbert (aka Mr. Wizard) and Dr. Frank Baxter.

 

Okay, I was a geek before it was fashionable.

 

Frank C. Baxter (left) and Eddie Albert from Our Mr. Sun

Frank C. Baxter (left) and Eddie Albert from Our Mr. Sun

 

For those with long memories, Frank Baxter was the `scientist’ host of a series of educational films from the 1950’s created by Bell Laboratories.   If you’ve never seen any of these Bell Science presentations, I have several archived on my other blog.  

 

You can read my tribute to the man in my essay Remembering Dr. Frank Baxter.

 

So I come by this reverence – or at least respect - for science honestly.  I grew up believing that though science we can make the is world a better place.

 

And most days, I still do.

 

But I’m genuinely worried that the proliferation (and apparent popularity) of conspiracy-driven fringe-pseudoscience diminishes those prospects greatly.   

 

The anti-vaccine hysteria of 2009, which obviously turned a lot of people off from the flu shot, is a prime example.  Next time we may be hit by a much more virulent virus, and this sort of anti-vaccine fear mongering could end up costing a lot of lives.

 

My generation, which saw the possibilities of the future, seems to have been followed by a cynical and suspicious Generation X-Files which sees shadowy conspiracies behind every government agency.  

 

Vaccines, they believe, are poisons used to depopulate the planet.  Pandemics aren’t naturally occurring events, they are man-made in a laboratory somewhere.  Our government’s only interest is to enrich big pharma.   And just about everything the government does is a prelude to martial law . . . 


 

My RSS feed aggregator brings me hundreds of news articles, editorials, and blog posts from around the world each day.  And a disturbing (and growing) percentage fall into the categories above.

 

This sort of dreck is apparently very popular, and drives a lot of traffic to these sites.   Let’s face it.  In the Internet business model, traffic equals revenue.  

 

Like the carnival side show, it really doesn’t matter what’s inside the tent.  All that matters is that people are enticed into paying their `one thin dime, 1/10th of a dollar’ to take a peek. 

 

The sad thing here is that there are hundreds of really good journalists and bloggers out there that work diligently to provide good information and analysis, but their efforts are increasingly being overshadowed by these contrarians at the gate.

 

While I sometimes succumb to temptation and attempt to highlight and critique some of the more egregious examples of this internet drivel, most days I try to resist.  

 

The last thing I want is to drive traffic to these sites.  Besides . . . once you start down that path . . . where do you stop?   

 

I’d have time for little else. 

 

So I usually swallow hard and choose to highlight a good journalist, website, or blogger instead  (see Reliable Sources In Flublogia).  

After all, ‘Tis said it is better to light a candle than curse the darkness ‘

 

Sadly, though, it never is as cathartic as a good old fashioned rant.

 

Not even close.

»» Read More

Weekly Roundup Of Flublogia

 

 

# 4286

 

 

Once again I’m back with a recap of some of the stories from in and around Flublogia (and or science blogs) from the past week (or so).

 

This is a subjective list of things that I found of interest, and by no means mentions every worthy blog post out there.  It is more of a sampling, and not always restricted to flu.

 

My apologies for the good stories I may miss.  So, with that said, in no particularly order . . .

 

We start this roundup with two pieces by Maryn McKenna on how MRSA is introduced and spread in a hospital environment.   The first appeared on CIDRAP (see New tool helps trace MRSA's local, global spread) and the second was a follow up blog post on Maryn’s Superbug Blog.

 

Maryn also shared with us a sneak peek at the cover art for her upcoming book on MRSA.   Congratulations, Maryn. 

 

Next up are two pieces by the Reveres at Effect Measure.

 

The first looks at attempts to define (and possibly control) the tools (at a cellular level)  that influenza viruses need in order to replicate.  In New tool to figure out what the flu virus does (and what it needs to do it), Revere looks at research that may lead someday to new types of antivirals.

 

In Another swine flu virus, the authors of Effect Measure look at the recent report that boy in Iowa recently (last September) contracted an H3N2 version of swine flu.   While no further spread has been detected, the Reveres remind us of why surveillance of these types of viruses is so important.

 

You can find my post on this story at H3N2 Swine Flu.

 

Although we’ve dozens of terrific newshounds working the Flu and Emerging Infectious Disease beat, I’d like to call your attention to two of them this morning, and their respective websites.

 

First is Ida at The Bird Flu Information Corner.

 

BFIC is a joint effort between Kobe University in Japan and the Institute of Tropical Disease, Airlangga University, Indonesia  and provides us with some of the best coverage and translations of Indonesian (Bahasan) news stories on the web.

 

 

Second is Commonground at Pandemic Information News.

 

Commonground is one of the most active of the flu forum newshounds, and posts at FluTrackers as well as on her own site.   She often finds and publishes foreign language stories out of Egypt, Vietnam, Indonesia (and other countries) days before the English language media picks up on them.

 

When you combine their work with that of dozens of others on flu forums (I follow the Flu Wiki and FluTrackers), you end up with a pretty effective news retrieval system. The time, patience, and expertise required to find, translate, and interpret these news stories in enormous.

 

My thanks and kudos go to all of the newshounds.

 

Another blog post that caught my eye this past week (I’m a sucker for disease history) was one from Professor Ian York at Mystery Rays from Outer Space.

 

In The good old days   York unveils some very old disease maps of the United States and the West Indies (circa 1856). 

 

image

 

While the reporting from CIDRAP news is always top-notch, a detailed examination of the Michigan Facemask/Hand Hygiene study by news Editor Robert Roos belongs near the top of my list of essential reading this week.

 

Masks plus hand hygiene reduced ILI in college dorm study

 


Of course, for the best daily news summary, I can think of no better stop than to visit Crof at Crofsblog.  And for news stories on a variety of infectious diseases, along with the latest out of Haiti, I’d direct you to Chen Qi.

 

 

A few of my own contributions this week to the Blogosphere include:

 

AFD’s Fourth Blogiversary
Study: H1N1 And Birds
Study: Effectiveness of NPIs Against ILI's
The MRSA Beat
Flu’s Double Whammy

 

 

Hopefully I’ve mentioned something you may have missed over the past week.

»» Read More

Weekly Roundup Of FluBlogia

 

 

# 4266

 

 

 

Once again I’m back with a recap of some of the stories from in and around Flublogia from the past week (or so).

 

This is a subjective list of things that I found of interest, and by no means mentions every worthy blog post out there.  It is more of a sampling.

 

My apologies for the good stories I may miss.  So, with that said, in no particularly order . . .

 

The big story, of course, is the horrendous impact of the earthquake in Haiti, which occurred on Tuesday.  The death toll is still unknown (and will likely never be accurately tallied), but will no doubt run in the tens of thousands.

 

So our first stop is the American Red Cross Disaster Newsroom, which carries updates on the relief effort going on in Haiti.  While you are there, you might consider making a donation.

 

image

 

You’ll also find updates, and ways you can donate to the relief efforts, as Save The Children  and CARE.org among others.

 

`Jimmy Jazz’, on the In Case of Emergency:Break Glass blog, has links to a number of important blogs and features on the earthquake.

 

Although technically not part of this week’s roundup, one of Jimmy’s articles from last year is especially timely, entitled Dead Bodies Do Not Cause Disease.   Revere at Effect Measure had a similar piece last year, as well.

 

Break Glass, by the way, has just celebrated its third Blogiversary.  Congratulations, Jimmy.   Blogs frequently come and go, but it is a real accomplishment to stay `on-the-air’ for 3 years running.

 

The indefatigable Crof at Crofsblog continues to produce the most comprehensive daily roundup of flu news on the net, and has added a number of reports on the Haitian disaster as well.

 

Next up, the return of Scott McPherson, who blogs exceedingly well, just not as often as his fans would like.   In Swine flu pandemic over? Far from over  Scott ponders what happens when this pandemic virus smolders in places l like rural China and India over the coming months.

 

Revere (well, one of them) continues their discussion on randomized trials verses observational studies at Effect Measure with:

 

Randomized trial versus observational study challenge, VI: randomization, first part

 [Previous installments: here, here, here, here, here]

One of the Reveres was also interviewed on Radio Sandy Springs by Sharon Sanders of FluTrackers last Monday.   It’s a terrific hour, even though there was audio trouble for the final couple of minutes.

01/11/10 Guest Revere of Effect Measure

Sharon Sander interviews one of the Reveres of the Effect Measure Blog

 

The week before, Sharon interviewed Professor Vincent Racaniello of the Virology Blog.  The link for that interview is:

 

01/04/10 Guest Vincent Racaniello, PhD

Sharon Sander interviews Vincent Racaniello, PhD


A couple of other flu related offerings from Effect Measure this week include:

 

Another swine flu virus

WHO prepares to don a hair shirt

 

Okay, it’s not flu related . . . but if you missed Potato salad, food poisoning and contortionists, you missed an incredible video of a little known variety act from the 1940s and a lesson in food poisoning.

 

 

If this sister act intrigues you, I wrote a bit more about them last March in my `other blog’  Master Of My Public Domain.

 

Hey, even flu bloggers can have eclectic interests.

 

 

CIDRAP News provides excellent coverage and analysis of H1N1 and other disease news, and while I can heartily recommend all of their reporting, a couple of features stood out for me this week.

 

Health officials, experts reject 'false pandemic' charges

WHO, vaccine group deny pandemic scare charges

 

Ida at the Bird Flu Information Corner – a joint effort between Kobe University in Japan and the Institute of Tropical Disease, Airlangga University, Indonesia – has been busy translating articles from the Indonesian Press on outbreaks of H5N1 in poultry, and some suspected (and confirmed) human infections.

 

As always, I am heavily reliant on the newshounds on the flu forums (I frequent Flu Wiki and FluTrackers) which continue to provide the best stream of raw news and information on emerging infectious diseases from around the world.

 

Given the events in California (a 6.5 earthquake off the coast) and in Haiti, several of my blogs have been about earthquake preparedness  . . . including one (see Shaken And (Hopefully) Stirred) that ran 3 days before the Haiti quake. 

Others include:

It Doesn’t Have To Be An Earthquake . . .
Inside My Bug Out Bag

 

 

And here at AFD you’ll find more than 25 entries since my last roundup.  Some you may be interested in checking out include:

 

The Migratory Bird Connection
H3N2 Swine Flu
CDC Updates Estimates Of Infections, Hospitalizations, and Deaths From H1N1
Swine Flu Sequelae

WHO To Review Their Pandemic Response

»» Read More

Weekly Roundup Of FluBlogia

 

 

 

# 4238

 

 

Continuing an experiment today.

 

Several times over the past month I’ve offered a recap of some of the stories from the previous week (or so) that caught my eye in Flublogia.   Today we continue in that vein.

 

This will be a subjective list of things that I found of interest, and is by no means intended to recap all of the news reports or mention every worthy blog post out there.  It is more of a sampling.

 

My apologies for the good stories I may miss.  In no particularly order . . .

 

 

First stop today is a podcast from Vincent Racaniello et. al. via TWiV (This week in Virology).   The January 2nd edition was a fascinating countdown of the top 10 virology stories of 2009.  

 

Hosts: Vincent Racaniello, Alan Dove, and Rich Condit  You can Download TWiV #64 (68 MB .mp3, 94 minutes).

 

You can also hear Professor Racaniello interviewed on Radio Sandy Springs by Sharon Sanders of FluTrackers, when the archive of last week’s broadcast is posted.  That should happen early this week, and should be located here.

 

 

Next is a terrific series by one of the`Reveres’ on Effect Measure about our reliance on Randomized Trials in science, and why they may not always beat out observational studies in scientific research.

 

Randomized trial versus observational study challenge

Randomized trial versus observational study challenge, II: meta-comments

Randomized trial versus observational study challenge, III: metaphysics

Randomized trial versus observational study challenge, IV: causation, concluded

 

Maryn McKenna writing on her Superbug Blog brought us important stories about :

 

Warning on ST398: Monitor this now

Questioning meat-raising and meat-eating — in eat-everything France

MRSA in pets - a closer look

 

Crof at Crofsblog continues to provide the best day-to-day coverage of flu news, although he took a well deserved few days off this week.  It is good to have him back, though.

 

 

As always, I am heavily reliant on the newshounds on the flu forums (I frequent Flu Wiki and FluTrackers) which continue to provide the best stream of raw news and information on emerging infectious diseases from around the world. 

 

CIDRAP News provides excellent coverage and analysis of H1N1 and other disease news, and I can think of no better example of their in-depth reporting than Lisa Schnirring’s recent piece entitled Fall flu wave tested pediatric hospitals with tough choices.

 

CIDRAP’s Novel H1N1 Influenza (Swine Flu) overview was updated on Friday (Jan 8th) and remains arguably the best, and most current fount of pandemic flu information on the web.

 

With Bird flu heating up in Indonesia, we once again find our attention drawn to the excellent work done by Ida at the Bird Flu Information Corner.  A joint venture between Kobe University in Japan and the Institute of Tropical Disease, Airlangga University, Indonesia – BFIC monitors news reports in the Indonesian press and provides English translations.

 

On Tuesday of last week, Kathy Freston of the Huffington Post interviewed Dr. Michael Greger about the potential of seeing a more virulent pandemic arise from factory farming practices.

 

And here at AFD you’ll find nearly 30 entries since New Years Day.  Some you may be interested in checking out include:

 

Sandman On Flu Risks For Seniors
Influenza’s Gastrointestinal Connection
Fluing The Friendly Skies (Revisited)
Mixing Vessels For Influenza
The Rise Of Emerging Infectious Diseases
»» Read More

Weekly Roundup Of FluBlogia

 

 

# 4194

 

 

Continuing an experiment today.

 

Since the holidays are upon us and the number of news stories is relatively low, for the next few weeks I will attempt to do a weekly recap of some of the biggest stories, the best blog posts, and most interesting information from Flublogia each Sunday or Monday Morning.

 

This will be a subjective list of things that caught my eye, and is by no means intended to recap all of the news reports or mention every worthy blog post out there.  It is more of a sampling.

 

My apologies for the good stories I may miss.  In no particularly order . . .

 

 

On Vincent Racaniello’s  Virology Blog we get an assessment of the efficacy of Tamiflu in the wake of a BMJ article (see BMJ: A Review Of Tamiflu’s Efficacy Against Seasonal Influenza) questioning its usefulness. 

 

In Influenza neuraminidase inhibitors work, Professor Racaniello gives us the results of a human study published nearly a decade ago that support the usefulness of the drug against influenza.


Also from Vincent Racaniello, the 63rd installment of TWiV (This week in Virology) Podcast.  A fascinating stroll through the world of virology each week.  Highly recommended for disease geeks everywhere.

 

From the Reveres at Effect Measure a pair of flu-related blogs to note.   First, an excellent overview of the the experimental antiviral being tested in Japan called T-705 – which while still a long way from being on your pharmacy shelves – shows serious promise.

 

In  A new front line drug for flu in the offing?  Revere gives us a good deal of background information on drug which is about to begin human trials.

 

Also, in CDC's 2009 flu wrap up presser  Revere takes a look at the CDC’s last flu press conference, and looks ahead to what might happen this spring.

 

Maryn McKenna, on her Superbug Blog, makes an important appeal to her readers to help support ProMed Mail, something I heartily endorse as well.   In  A plea, and not for me: Support ProMED she reminds us of the important – donation supported – work done 24/7 by the editors of ProMail Med.

 

We are all eagerly awaiting the publication of Maryn’s new book Superbug: The Fatal Menace of MRSA (Hardcover) in March.  In the meantime, her excellent MRSA blog  Superbug is now available on Kindle.

 

CIDRAP News provides excellent coverage and analysis of H1N1 and other disease news, and Mayrn McKenna’s report H1N1 poses grave risk to pregnant women, new moms is a perfect example.   You’ll find additional terrific reporting from CIDRAP by Lisa Schnirring and Robert Roos.

 

Crof over at Crofsblog, not only keeps the best tabs on the daily news of the pandemic (along with other flu issues), but also writes terrific commentary from time to time as well.   His Blogging H1N1: Lessons so far is a prime example.

 

Crof may be the hardest working blogger in FluBlogia, and his translations of Spanish Language articles from Mexico and South America are our best window into what is going on in that part of the world.

 

Chen Qi continues to provide a terrific newspaper-style blog of Flu and Emerging Infectious disease news.  One of the most readable sources of information – gleaned from all over the world – on the next.

 

As a blogger, I am highly dependent upon journalists who cover the `flu beat’, and while there are many excellent reporters out there, two probably show up on these pages more than any others.

 

Helen Branswell of the Canadian Press and Maggie Fox of Reuters.

 

Why?   Because they understand the science, and I trust them to get the story right.


A few examples of the reports these two reporters have recently filed, all of which I used as fodder for this blog.

 

H1N1 flu virus voted top news story of 2009 in Canadian Press survey  - Branswell

Experts say pandemic could have a silver lining if it knocks out other viruses – Branswell

Other viruses abound in U.S. flu season, tests show - Fox
New Japanese flu drug protects mice from avian flu – Fox

 

My thanks to both of you, and to many of your colleagues, for the hard work you are doing getting the latest pandemic information out. 

 

Now is a good time to remind my readers that agencies like the Red Cross, Red Crescent, CARE, Save The Children, The H2P Project, UNICEF, and others are working around the world every day to combat poverty and disease, and are on the front lines every day.

 

They could use your support.

 

These NGO’s do a great deal with very little, and even small donations can help make a difference.   You can find their websites and blogs in my sidebar.

 


I am somewhat chagrined to admit that it has only been recently that I’ve become a regular visitor to  Mystery Rays From Outer Space, a fascinating blog by assistant professor of immunology and virology at Michigan State University, Ian York, Ph. D.

 

I am thoroughly enjoying going through the Mystery Rays archives, while wondering how I could have gone this long without discovering this resource.

 

As always, I am heavily reliant on the newshounds on the flu forums (I frequent Flu Wiki and FluTrackers) which continue to provide the best stream of raw news and information on emerging infectious diseases from around the world.  

 

As for my own blogging over this past short holiday week, in addition to covering influenza and disease news, a few of my more in-depth blogs included:

 

Another H9 Report From Hong Kong
Cytokine Storm Warnings
Enough To Make You ILI
US: Dog Tests Positive For H1N1

 

All of this represents just a sampling of this week in Flublogia.  As you can see, this is a collaborative effort. No one reporter, blogger, or flu forum could cover it all. 

 

Hopefully this recap will highlight some of the stories you may have missed over the past week.

 

There are a lot of terrific bloggers, flu forums, agencies, and organizations from around the world who contribute to Flublogia each and every week. 

 

You can find a lot of them in my sidebar.

 

It is worth the time to explore these resources, and go back through their archives, looking for dusty, but no-less-valuable gems of writing.

»» Read More

PBS MediaShift Looks At Flu Bloggers

 

 

# 4132

 

 

A number of weeks ago I was contacted by Simon Owens who writes for, among other venues,  PBS’s Mediashift website.   He told me he was doing a piece on Flu Bloggers, and asked if I’d consent to an interview.  

 

We spoke for about 20 minutes on the phone later that day.


Today that a bit of that interview, along with terrific interviews with Crof at Crofsblog and Vince Racaniello at the Virology Blog, appears on the Mediashift website.

 

Can H1N1 Flu Bloggers Help Battle Pandemic Misinformation?

 

by Simon Owens

Vincent Racaniello, a professor of microbiology at Columbia University Medical Center, remembers the last flu pandemic, which occurred in 1968. "It's a great contrast [with today], because back then you had to wait weeks for information, and the only way you got it was through newspapers and scientific journals, and now of course we have instant dissemination of everything," Racaniello... more »

»» Read More