Showing posts with label Ed Yong. Show all posts
Showing posts with label Ed Yong. Show all posts

PNAS: Virulence & Transmissibility Of H1N2 Influenza Virus In Ferrets

 

 

 

# 6547

 

Timing is, as they say, everything.

 

And coming on the heels the announcement 10 days ago of three human infections with a swine-origin H1N2 influenza (see Minnesota Reports Swine H1N2v Flu), a study that appears today in PNAS is certainly well timed.

 

The study, conducted at Chungbuk National University South Korea examined viruses circulating in Korean swine (H1N2 & H3N2), and found - for the most part - they were not particularly pathogenic in ferrets.

 

The exception was a triple reassortant H1N2 virus dubbed Sw/1204, that had picked up two notable mutations, and it not only transmitted efficiently, it also caused severe (even fatal) disease in the test animals.

 

The study, is called:

 

Virulence and transmissibility of H1N2 influenza virus in ferrets imply the continuing threat of triple-reassortant swine viruses

Philippe Noriel Q. Pascua, Min-Suk Song, Jun Han Lee, Yun Hee Baek, Hyeok-il Kwon, Su-Jin Park, Eun Hye Choi, Gyo-Jin Lim, Ok-Jun Lee, Si-Wook Kim, Chul-Joong Kim, Moon Hee Sung, Myung Hee Kim, Sun-Woo Yoon, Elena A. Govorkova, Richard J. Webby, Robert G. Webster, and Young-Ki Choi

 

Ed Yong, writing for Nature has the details  on this paper:

 

Need for flu surveillance reiterated

Study of Korean pigs finds virus with pandemic potential.

Ed Yong 10 September 2012

 

 

One to the two mutations discussed in this paper is hemagglutinin (HA) (Asp-225-Gly) – also known as D225G – which is something we’ve looked at a number of times in the past.

 

This mutation involves a single amino acid change in the HA gene at position 225 (H3 numbering) from aspartic acid (D) or Asp to glycine (G), and was first linked to more severe pandemic flu by Norwegian Scientists in 2009.

 

The evidence for the D222G/N  amino acid substitution driving increased virulence, and deep lung infection, has been mixed, however. A few earlier blogs include:

 

Eurosurveillance: Debating The D222G/N Mutation In H1N1
Study: Receptor Binding Changes With H1N1 D222G Mutation
WER Review: D222G Mutation In H1N1

 

The second mutation, called NA-315 (serine to asparagine the in neuraminidase) isn’t as well studied, but is believed to assist the virus in breaking out of infected cells after replicating.

 

As Ed Yong mentions in his article - viruses often have multiple amino acid changes – and we are really just beginning to understand the ramifications of these different genetic combinations. 

 

Whether this particular virus ever ends up posing a public health threat is impossible to say, but it does illustrate these swine reassortant viruses aren’t always mild in mammals.

 

New strains of influenza come about from reassortment; the swapping of genetic material between two different flu strains in a common host. We tend to focus on swine, simply because they are highly susceptible to a variety of influenza viruses, and have a history of producing reassorted viruses.  

 

Reassortant pig

 

The pandemic virus that emerged in the spring of 2009 was the end product of several influenza strains that had kicked around the world’s swine population for many years, trading bits of genetic material back and forth, until they produced a version capable of jumping to humans.

 

But any host (human, swine, avian, or other mammal) could produce a reassorted virus.

 

For more on the flu risks from swine reassortments, I continue to heartily recommend Helen Branswell’s terrific piece in SciAm  from late 2010 called Flu Factories.

Flu Factories

The next pandemic virus may be circulating on U.S. pig farms, but health officials are struggling to see past the front gate

By Helen Branswell  | December 27, 2010 |

 

And for some of my earlier looks at swine influenza, you may wish to revisit:

 

H3N2v: When Pigs Flu

You Say You Want An Evolution?

The (Swine) Influenza Reassortment Puzzle

»» Read More

Referral: Ed Yong On Poultry Vaccine Recombination

 

 

# 6433

 

A fascinating report appears in the journal Science today, which looked at the unexpected recombination of two weakened herpesviruses used in poultry vaccines, that resulted in the generation of a more fit and virulent virus.

 

Attenuated Vaccines Can Recombine to Form Virulent Field Viruses

Sang-Won Lee, Philip F. Markham, Mauricio J. C. Coppo, Alistair R. Legione, John F. Markham, Amir H. Noormohammadi, Glenn F. Browning, Nino Ficorilli, Carol A. Hartley, Joanne M. Devlin

 

Ed Yong, writing in his excellent Not Exactly Rocket Science Blog for Discover Magazine has the details, background, and analysis of why this sort of unexpected merging of live attenuated viruses is unlikely to be a problem with human vaccines.

 

By all means, take a side trip to read Ed’s:

 

Chicken vaccines merged to form live viruses and caused outbreaks of irony

»» Read More

Researchers Discover New Flu Gene

image

 

# 6409

 


A reoccurring theme in this blog is just how much we have yet to learn about how our immune systems, influenza viruses, and other pathogens function.

 

Illustrative of this fact is the surprise announcement yesterday that researchers at Universities of Cambridge, Cork, Edinburgh and Utah, the Institute of Systems Biology in Seattle and the NIH have discovered a previously unknown gene hidden inside the influenza virus genome.

 

Dubbed PA-X, this gene (when active) helps attenuates the virulence of the virus. When this gene does not function properly, the flu virus can over stimulate the immune system, making the infection worse.

 

This discovery appears in a research article published yesterday by Science.

 

An Overlapping Protein-Coding Region in Influenza A Virus Segment 3 Modulates the Host Response

B. W. Jagger, H. M. Wise,J. C. Kash, K.-A. Walters, N. M. Wills, Y.-L. Xiao, R. L. Dunfee, L. M. Schwartzman, A. Ozinsky, G. L. Bell, R. M. Dalton, A. Lo, S. Efstathiou, J. F. Atkins, A. E. Firth, J. K. Taubenberger, P. Digard

 

While a short press release from the University of Edinburgh is available (see Gene discovery helps explain how flu can cause severe infections), Ed Yong’s Blog at Discover Magazine provides some of the best analysis of this research that I’ve seen. 

 

At this point, I will step aside and invite you to read Ed’s excellent article:

 

New flu gene found hiding in plain sight, and affects severity of infections

Ed Yong – Not Exactly Rocket Science

»» Read More